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authorRepository QA checks <repo-qa-checks@gentoo.org>2017-04-14 19:02:28 +0000
committerRepository QA checks <repo-qa-checks@gentoo.org>2017-04-14 19:02:28 +0000
commit7ff9ff0f3afacfaa75fc24e1bc0bd597d5032d55 (patch)
tree84c982c08624ffe8e9bf6494460bad1195978f48
parentMerge updates from master (diff)
downloadgentoo-7ff9ff0f3afacfaa75fc24e1bc0bd597d5032d55.tar.gz
gentoo-7ff9ff0f3afacfaa75fc24e1bc0bd597d5032d55.tar.bz2
gentoo-7ff9ff0f3afacfaa75fc24e1bc0bd597d5032d55.zip
2017-04-14 19:02:27 UTC
-rw-r--r--metadata/md5-cache/media-libs/giflib-4.1.6-r32
-rw-r--r--metadata/md5-cache/sci-biology/trnascan-se-1.3112
-rw-r--r--metadata/md5-cache/sci-chemistry/ghemical-3.0.04
-rw-r--r--metadata/md5-cache/sci-chemistry/threeV-1.212
-rw-r--r--metadata/md5-cache/sci-chemistry/threeV-1.2-r112
-rw-r--r--metadata/md5-cache/sci-chemistry/xyza2pipe-2010112911
-rw-r--r--metadata/md5-cache/sci-chemistry/xyza2pipe-201210016
-rw-r--r--metadata/md5-cache/sci-libs/libexcelformat-1010164
-rw-r--r--metadata/md5-cache/sci-libs/libghemical-3.0.010
-rw-r--r--metadata/md5-cache/sci-libs/libpdb++-04072812
-rw-r--r--metadata/md5-cache/sci-libs/libpdb++-040728-r16
-rw-r--r--metadata/md5-cache/sci-libs/libpdb-99111212
-rw-r--r--metadata/md5-cache/sci-libs/libpdb-991112-r14
-rw-r--r--metadata/pkg_desc_index8
-rw-r--r--metadata/timestamp.chk2
15 files changed, 40 insertions, 77 deletions
diff --git a/metadata/md5-cache/media-libs/giflib-4.1.6-r3 b/metadata/md5-cache/media-libs/giflib-4.1.6-r3
index 99cb15173042..109e13595272 100644
--- a/metadata/md5-cache/media-libs/giflib-4.1.6-r3
+++ b/metadata/md5-cache/media-libs/giflib-4.1.6-r3
@@ -11,4 +11,4 @@ SLOT=0
SRC_URI=mirror://sourceforge/giflib/giflib-4.1.6.tar.bz2
_eclass_exported_funcs=src_prepare:- src_configure:multilib-minimal src_compile:multilib-minimal src_test:multilib-minimal src_install:multilib-minimal
_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 epunt-cxx f8073339d152f56626493f43d8ba4691 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils e7491451996e8b54c3caeb713285b0fb libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multibuild f2f24d4e28bce643f56a6e1e57b82a66 multilib 0236be304ee52e7f179ed2f337075515 multilib-build eed53a6313267c9fbcd35fc384bd0087 multilib-minimal 9139c3a57e077cb8e0d0f73ceb080b89 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee
-_md5_=126ac22f48668d2d31144c68f991c83b
+_md5_=0b1f92f38180792d0413966afb6ff823
diff --git a/metadata/md5-cache/sci-biology/trnascan-se-1.31 b/metadata/md5-cache/sci-biology/trnascan-se-1.31
index 5cc6d31119f5..5841d689efc6 100644
--- a/metadata/md5-cache/sci-biology/trnascan-se-1.31
+++ b/metadata/md5-cache/sci-biology/trnascan-se-1.31
@@ -1,13 +1,11 @@
-DEFINED_PHASES=install prepare test unpack
-DEPEND=dev-lang/perl:=[-build(-)]
+DEFINED_PHASES=install prepare test
DESCRIPTION=tRNA detection in large-scale genome sequences
-EAPI=5
+EAPI=6
HOMEPAGE=http://lowelab.ucsc.edu/tRNAscan-SE/
KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
-RDEPEND=dev-lang/perl:=[-build(-)]
SLOT=0
SRC_URI=http://lowelab.ucsc.edu/software/tRNAscan-SE.tar.gz -> trnascan-se-1.31.tar.gz
-_eclass_exported_funcs=src_unpack:unpacker src_prepare:- src_test:- src_install:-
-_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 epunt-cxx f8073339d152f56626493f43d8ba4691 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils e7491451996e8b54c3caeb713285b0fb ltprune 2770eed66a9b8ef944714cd0e968182e multilib 0236be304ee52e7f179ed2f337075515 multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions a884a53a49bebbf90cb29dd191f73613 perl-module 3485abc93409cd3433ec6a0df5f64867 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70
-_md5_=f5e80fc8c3f0924edd45360e54272906
+_eclass_exported_funcs=src_prepare:- src_test:- src_install:-
+_eclasses_=multilib 0236be304ee52e7f179ed2f337075515 perl-functions a884a53a49bebbf90cb29dd191f73613 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee
+_md5_=6b417e9af51f88ebc0b99d9f38e49a60
diff --git a/metadata/md5-cache/sci-chemistry/ghemical-3.0.0 b/metadata/md5-cache/sci-chemistry/ghemical-3.0.0
index cd1144f471d7..c25503bb8f10 100644
--- a/metadata/md5-cache/sci-chemistry/ghemical-3.0.0
+++ b/metadata/md5-cache/sci-chemistry/ghemical-3.0.0
@@ -1,7 +1,7 @@
DEFINED_PHASES=configure install prepare
DEPEND=dev-libs/glib:2 gnome-base/libglade:2.0 sci-chemistry/mpqc >=sci-libs/libghemical-3.0.0 >=x11-libs/liboglappth-1.0.0 virtual/opengl x11-libs/pango x11-libs/gtk+:2 x11-libs/gtkglext openbabel? ( sci-chemistry/openbabel ) virtual/pkgconfig >=app-portage/elt-patches-20170317 !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.15:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4
DESCRIPTION=Chemical quantum mechanics and molecular mechanics
-EAPI=3
+EAPI=6
HOMEPAGE=http://bioinformatics.org/ghemical/
IUSE=openbabel seamonkey threads
KEYWORDS=~amd64 ~ppc ~x86
@@ -11,4 +11,4 @@ SLOT=0
SRC_URI=http://bioinformatics.org/ghemical/download/current/ghemical-3.0.0.tar.gz
_eclass_exported_funcs=src_prepare:- src_configure:- src_install:-
_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 epunt-cxx f8073339d152f56626493f43d8ba4691 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils e7491451996e8b54c3caeb713285b0fb libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 0236be304ee52e7f179ed2f337075515 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee
-_md5_=0c0e90a406e7e545afd66a6f79962aad
+_md5_=09924a26f6a654a35e06cfa24643a300
diff --git a/metadata/md5-cache/sci-chemistry/threeV-1.2 b/metadata/md5-cache/sci-chemistry/threeV-1.2
deleted file mode 100644
index c079a30efb73..000000000000
--- a/metadata/md5-cache/sci-chemistry/threeV-1.2
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=install prepare
-DESCRIPTION=3V: Voss Volume Voxelator
-EAPI=3
-HOMEPAGE=http://geometry.molmovdb.org/3v/
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-2
-PDEPEND=sci-chemistry/msms-bin
-SLOT=0
-SRC_URI=http://geometry.molmovdb.org/3v/3v-1.2.tgz
-_eclass_exported_funcs=src_prepare:- src_install:-
-_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 epunt-cxx f8073339d152f56626493f43d8ba4691 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils e7491451996e8b54c3caeb713285b0fb ltprune 2770eed66a9b8ef944714cd0e968182e multilib 0236be304ee52e7f179ed2f337075515 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee
-_md5_=c2574a5861be992dacebac7cdb3d60ab
diff --git a/metadata/md5-cache/sci-chemistry/threeV-1.2-r1 b/metadata/md5-cache/sci-chemistry/threeV-1.2-r1
new file mode 100644
index 000000000000..97a8c88ec31b
--- /dev/null
+++ b/metadata/md5-cache/sci-chemistry/threeV-1.2-r1
@@ -0,0 +1,12 @@
+DEFINED_PHASES=install prepare
+DESCRIPTION=3V: Voss Volume Voxelator
+EAPI=6
+HOMEPAGE=http://geometry.molmovdb.org/3v/
+KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
+LICENSE=GPL-2
+PDEPEND=sci-chemistry/msms-bin
+SLOT=0
+SRC_URI=http://geometry.molmovdb.org/3v/3v-1.2.tgz
+_eclass_exported_funcs=src_prepare:- src_install:-
+_eclasses_=multilib 0236be304ee52e7f179ed2f337075515 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee
+_md5_=5ca6079a9193f10a01a27b188fadd411
diff --git a/metadata/md5-cache/sci-chemistry/xyza2pipe-20101129 b/metadata/md5-cache/sci-chemistry/xyza2pipe-20101129
deleted file mode 100644
index f82839bf4794..000000000000
--- a/metadata/md5-cache/sci-chemistry/xyza2pipe-20101129
+++ /dev/null
@@ -1,11 +0,0 @@
-DEFINED_PHASES=install prepare
-DESCRIPTION=Cross conversion environment of NMR spectra
-EAPI=3
-HOMEPAGE=http://fermi.pharm.hokudai.ac.jp/olivia/api/index.php/Xyza2pipe_src
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=olivia
-SLOT=0
-SRC_URI=mirror://gentoo/xyza2pipe-20101129.tgz
-_eclass_exported_funcs=src_prepare:- src_install:-
-_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 epunt-cxx f8073339d152f56626493f43d8ba4691 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils e7491451996e8b54c3caeb713285b0fb ltprune 2770eed66a9b8ef944714cd0e968182e multilib 0236be304ee52e7f179ed2f337075515 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee
-_md5_=58caffc318d865e381ac92878eb3ecff
diff --git a/metadata/md5-cache/sci-chemistry/xyza2pipe-20121001 b/metadata/md5-cache/sci-chemistry/xyza2pipe-20121001
index bfff48fd5581..9a9853b21639 100644
--- a/metadata/md5-cache/sci-chemistry/xyza2pipe-20121001
+++ b/metadata/md5-cache/sci-chemistry/xyza2pipe-20121001
@@ -1,11 +1,11 @@
DEFINED_PHASES=install prepare
DESCRIPTION=Cross conversion environment of NMR spectra
-EAPI=5
+EAPI=6
HOMEPAGE=http://fermi.pharm.hokudai.ac.jp/olivia/api/index.php/Xyza2pipe_src
KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
LICENSE=olivia
SLOT=0
SRC_URI=http://fermi.pharm.hokudai.ac.jp/olivia/documents/xyza2pipe.tgz -> xyza2pipe-20121001.tgz
_eclass_exported_funcs=src_prepare:- src_install:-
-_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 epunt-cxx f8073339d152f56626493f43d8ba4691 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils e7491451996e8b54c3caeb713285b0fb ltprune 2770eed66a9b8ef944714cd0e968182e multilib 0236be304ee52e7f179ed2f337075515 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee
-_md5_=4a9202aad37eef0caadbe48609179773
+_eclasses_=multilib 0236be304ee52e7f179ed2f337075515 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee
+_md5_=c93da6bf85d6833951ad1ba692d826ed
diff --git a/metadata/md5-cache/sci-libs/libexcelformat-101016 b/metadata/md5-cache/sci-libs/libexcelformat-101016
index 6feef1503cf0..d6d6214d326b 100644
--- a/metadata/md5-cache/sci-libs/libexcelformat-101016
+++ b/metadata/md5-cache/sci-libs/libexcelformat-101016
@@ -1,6 +1,6 @@
DEFINED_PHASES=install prepare
DESCRIPTION=reading, writing, and editing of XLS (BIFF8 format) files using C++
-EAPI=3
+EAPI=6
HOMEPAGE=http://www.codeproject.com/KB/office/ExcelFormat.aspx
KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
LICENSE=CPOL
@@ -8,4 +8,4 @@ SLOT=0
SRC_URI=mirror://gentoo/libexcelformat-101016.tar.bz2
_eclass_exported_funcs=src_prepare:- src_install:-
_eclasses_=multilib 0236be304ee52e7f179ed2f337075515 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee
-_md5_=d297b2dffc847dc7bf399b84b19998c9
+_md5_=9019cf084ce97d16212726579bc152b6
diff --git a/metadata/md5-cache/sci-libs/libghemical-3.0.0 b/metadata/md5-cache/sci-libs/libghemical-3.0.0
index bcc59c9886b0..2978e0da9146 100644
--- a/metadata/md5-cache/sci-libs/libghemical-3.0.0
+++ b/metadata/md5-cache/sci-libs/libghemical-3.0.0
@@ -1,7 +1,7 @@
-DEFINED_PHASES=configure install prepare
+DEFINED_PHASES=configure prepare
DEPEND=mopac7? ( >=sci-chemistry/mopac7-1.13-r1 ) mpqc? ( >=sci-chemistry/mpqc-2.3.1-r1 virtual/blas virtual/lapack ) virtual/pkgconfig >=app-portage/elt-patches-20170317 !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.15:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4
DESCRIPTION=Chemical quantum mechanics and molecular mechanics
-EAPI=3
+EAPI=6
HOMEPAGE=http://bioinformatics.org/ghemical/
IUSE=mopac7 mpqc static-libs
KEYWORDS=~amd64 ~ppc ~x86
@@ -9,6 +9,6 @@ LICENSE=GPL-2
RDEPEND=mopac7? ( >=sci-chemistry/mopac7-1.13-r1 ) mpqc? ( >=sci-chemistry/mpqc-2.3.1-r1 virtual/blas virtual/lapack )
SLOT=0
SRC_URI=http://www.bioinformatics.org/ghemical/download/current/libghemical-3.0.0.tar.gz
-_eclass_exported_funcs=src_prepare:- src_configure:- src_install:-
-_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 epunt-cxx f8073339d152f56626493f43d8ba4691 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils e7491451996e8b54c3caeb713285b0fb libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 0236be304ee52e7f179ed2f337075515 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee
-_md5_=656ee6fe859d7939f507ec5d0b13b68d
+_eclass_exported_funcs=src_prepare:- src_configure:-
+_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 0236be304ee52e7f179ed2f337075515 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee
+_md5_=1ba553b66144e13818480bee77081a9b
diff --git a/metadata/md5-cache/sci-libs/libpdb++-040728 b/metadata/md5-cache/sci-libs/libpdb++-040728
deleted file mode 100644
index 21e749db5de5..000000000000
--- a/metadata/md5-cache/sci-libs/libpdb++-040728
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile install prepare unpack
-DEPEND=app-arch/sharutils
-DESCRIPTION=PDB Record I/O Libraries -- c++ version
-EAPI=3
-HOMEPAGE=http://www.cgl.ucsf.edu/Overview/software.html
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=BSD
-SLOT=0
-SRC_URI=mirror://gentoo/libpdb++-040728.shar
-_eclass_exported_funcs=src_unpack:- src_prepare:- src_compile:- src_install:-
-_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 epunt-cxx f8073339d152f56626493f43d8ba4691 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils e7491451996e8b54c3caeb713285b0fb ltprune 2770eed66a9b8ef944714cd0e968182e multilib 0236be304ee52e7f179ed2f337075515 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee
-_md5_=fa114559db79b51cd166a62452293b7e
diff --git a/metadata/md5-cache/sci-libs/libpdb++-040728-r1 b/metadata/md5-cache/sci-libs/libpdb++-040728-r1
index aa992684c9ae..eeb76b6a2057 100644
--- a/metadata/md5-cache/sci-libs/libpdb++-040728-r1
+++ b/metadata/md5-cache/sci-libs/libpdb++-040728-r1
@@ -1,7 +1,7 @@
DEFINED_PHASES=compile install prepare unpack
DEPEND=app-arch/sharutils
DESCRIPTION=PDB Record I/O Libraries -- c++ version
-EAPI=4
+EAPI=6
HOMEPAGE=http://www.cgl.ucsf.edu/Overview/software.html
IUSE=static-libs
KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
@@ -9,5 +9,5 @@ LICENSE=BSD
SLOT=0
SRC_URI=mirror://gentoo/libpdb++-040728.shar
_eclass_exported_funcs=src_unpack:- src_prepare:- src_compile:- src_install:-
-_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 epunt-cxx f8073339d152f56626493f43d8ba4691 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils e7491451996e8b54c3caeb713285b0fb ltprune 2770eed66a9b8ef944714cd0e968182e multilib 0236be304ee52e7f179ed2f337075515 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee
-_md5_=90d418461f6289a5585a51095e8351b4
+_eclasses_=multilib 0236be304ee52e7f179ed2f337075515 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee
+_md5_=6a898b56f1363b0d1a06ce2650bbee9b
diff --git a/metadata/md5-cache/sci-libs/libpdb-991112 b/metadata/md5-cache/sci-libs/libpdb-991112
deleted file mode 100644
index 06309dd451a2..000000000000
--- a/metadata/md5-cache/sci-libs/libpdb-991112
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile install prepare unpack
-DEPEND=app-arch/sharutils
-DESCRIPTION=PDB Record I/O Libraries -- c version
-EAPI=3
-HOMEPAGE=http://www.cgl.ucsf.edu/Overview/software.html
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=BSD
-SLOT=0
-SRC_URI=mirror://gentoo/libpdb-991112.shar
-_eclass_exported_funcs=src_unpack:- src_prepare:- src_compile:- src_install:-
-_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 epunt-cxx f8073339d152f56626493f43d8ba4691 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils e7491451996e8b54c3caeb713285b0fb ltprune 2770eed66a9b8ef944714cd0e968182e multilib 0236be304ee52e7f179ed2f337075515 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee
-_md5_=afb30895eca574bf395314437646f1de
diff --git a/metadata/md5-cache/sci-libs/libpdb-991112-r1 b/metadata/md5-cache/sci-libs/libpdb-991112-r1
index 03639c98d32f..b941204ca25e 100644
--- a/metadata/md5-cache/sci-libs/libpdb-991112-r1
+++ b/metadata/md5-cache/sci-libs/libpdb-991112-r1
@@ -1,7 +1,7 @@
DEFINED_PHASES=compile install prepare unpack
DEPEND=app-arch/sharutils
DESCRIPTION=PDB Record I/O Libraries -- c version
-EAPI=4
+EAPI=6
HOMEPAGE=http://www.cgl.ucsf.edu/Overview/software.html
IUSE=static-libs
KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
@@ -10,4 +10,4 @@ SLOT=0
SRC_URI=mirror://gentoo/libpdb-991112.shar
_eclass_exported_funcs=src_unpack:- src_prepare:- src_compile:- src_install:-
_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 epunt-cxx f8073339d152f56626493f43d8ba4691 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils e7491451996e8b54c3caeb713285b0fb ltprune 2770eed66a9b8ef944714cd0e968182e multilib 0236be304ee52e7f179ed2f337075515 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee
-_md5_=21498530942cb6b7c15fa28f39fa5152
+_md5_=994ad396dd2be24364a99a945c35df0e
diff --git a/metadata/pkg_desc_index b/metadata/pkg_desc_index
index 11b98b2869e2..27411e4af489 100644
--- a/metadata/pkg_desc_index
+++ b/metadata/pkg_desc_index
@@ -16153,7 +16153,7 @@ sci-chemistry/sparky 3.115-r2: Graphical NMR assignment and integration program
sci-chemistry/suitename 0.3.070628: The ROC RNA Ontology Consortium consensus RNA backbone nomenclature and conformer-list development
sci-chemistry/surf 1.0: Solvent accesible Surface calculator
sci-chemistry/theseus 2.0.6 3.0.0 3.3.0: Maximum likelihood superpositioning and analysis of macromolecular structures
-sci-chemistry/threeV 1.2: 3V: Voss Volume Voxelator
+sci-chemistry/threeV 1.2-r1: 3V: Voss Volume Voxelator
sci-chemistry/tinker 7.1.2: Molecular modeling package that includes force fields, such as AMBER and CHARMM
sci-chemistry/tm-align 20140601 20150914: Quick & Accurate Structural Alignment
sci-chemistry/viewmol 2.4.1-r3: Open-source graphical front end for computational chemistry programs
@@ -16165,7 +16165,7 @@ sci-chemistry/wxmacmolplt 7.5-r1: Chemical 3D graphics program with GAMESS input
sci-chemistry/xds-bin 20170430: Software for processing single-crystal X-ray monochromatic diffraction data
sci-chemistry/xdsgui 0_p130530: GUI for XDS that is supposed to help both novice and experienced users
sci-chemistry/xdsstat-bin 140225: Prints various statistics (that are not available from XDS itself)
-sci-chemistry/xyza2pipe 20101129 20121001: Cross conversion environment of NMR spectra
+sci-chemistry/xyza2pipe 20121001: Cross conversion environment of NMR spectra
sci-electronics/Stage 4.1.1 9999: The Stage Robot Simulator
sci-electronics/alliance 5.0.20110203: Digital IC design tools (simulation, synthesis, place/route, etc...)
sci-electronics/balsa 4.0-r1: The Balsa asynchronous synthesis system
@@ -16426,8 +16426,8 @@ sci-libs/libmems 1.6_p1-r3 9999: Library for sci-biology/mauve
sci-libs/libmuscle 3.7-r3: Library for sci-biology/mauve
sci-libs/libnova 0.12.3 0.14.0 0.15.0: Celestial Mechanics and Astronomical Calculation Library
sci-libs/liborigin 20110829: Library for reading OriginLab OPJ project files
-sci-libs/libpdb 991112 991112-r1: PDB Record I/O Libraries -- c version
-sci-libs/libpdb++ 040728 040728-r1: PDB Record I/O Libraries -- c++ version
+sci-libs/libpdb 991112-r1: PDB Record I/O Libraries -- c version
+sci-libs/libpdb++ 040728-r1: PDB Record I/O Libraries -- c++ version
sci-libs/libqalculate 0.9.7-r1 0.9.9: A modern multi-purpose calculator library
sci-libs/libsigrok 0.3.0 0.4.0 9999: basic hardware drivers for logic analyzers and input/output file format support
sci-libs/libsigrokdecode 0.3.0 0.4.0 0.4.1 9999: provide (streaming) protocol decoding functionality
diff --git a/metadata/timestamp.chk b/metadata/timestamp.chk
index 84ca0d81f869..292ad4b6c82e 100644
--- a/metadata/timestamp.chk
+++ b/metadata/timestamp.chk
@@ -1 +1 @@
-Fri, 14 Apr 2017 18:02:30 +0000
+Fri, 14 Apr 2017 19:02:28 +0000